Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Gm15693-201ENSMUST00000120470 637 ntBASIC17.64■□□□□ 0.41
Clrn2B2RVW2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn2B2RVW2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Gm9824-201ENSMUST00000178707 561 ntBASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Gm27437-201ENSMUST00000183429 107 ntBASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Gm38225-201ENSMUST00000194001 393 ntBASIC17.62■□□□□ 0.41
Clrn2B2RVW2 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.62■□□□□ 0.41
Clrn2B2RVW2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Gm5745-201ENSMUST00000183748 313 ntBASIC17.61■□□□□ 0.41
Clrn2B2RVW2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.61■□□□□ 0.41
Clrn2B2RVW2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Gm8410-201ENSMUST00000117225 605 ntBASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms