Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.29□□□□□ -0.44
Chd6A3KFM7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd6A3KFM7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.28□□□□□ -0.44
Chd6A3KFM7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Gm9522-201ENSMUST00000182394 926 ntBASIC12.28□□□□□ -0.44
Chd6A3KFM7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.28□□□□□ -0.44
Chd6A3KFM7 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.28□□□□□ -0.44
Chd6A3KFM7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd6A3KFM7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.28□□□□□ -0.44
Chd6A3KFM7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Mir1897-201ENSMUST00000122581 272 ntBASIC12.28□□□□□ -0.44
Chd6A3KFM7 AA619741-201ENSMUST00000195095 646 ntBASIC12.28□□□□□ -0.44
Chd6A3KFM7 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.28□□□□□ -0.44
Chd6A3KFM7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd6A3KFM7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd6A3KFM7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd6A3KFM7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Chd6A3KFM7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Chd6A3KFM7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd6A3KFM7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Chd6A3KFM7 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.27□□□□□ -0.44
Chd6A3KFM7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.27□□□□□ -0.44
Chd6A3KFM7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.27□□□□□ -0.44
Chd6A3KFM7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd6A3KFM7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd6A3KFM7 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.27□□□□□ -0.44
Chd6A3KFM7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Chd6A3KFM7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd6A3KFM7 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd6A3KFM7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.27□□□□□ -0.44
Chd6A3KFM7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd6A3KFM7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chd6A3KFM7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd6A3KFM7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd6A3KFM7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Chd6A3KFM7 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.27□□□□□ -0.45
Chd6A3KFM7 Gm6013-201ENSMUST00000212264 699 ntBASIC12.27□□□□□ -0.45
Chd6A3KFM7 Gm19220-201ENSMUST00000222682 803 ntBASIC12.27□□□□□ -0.45
Chd6A3KFM7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd6A3KFM7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd6A3KFM7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd6A3KFM7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd6A3KFM7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd6A3KFM7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Chd6A3KFM7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.26□□□□□ -0.45
Chd6A3KFM7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Gm7399-201ENSMUST00000032395 858 ntBASIC12.26□□□□□ -0.45
Chd6A3KFM7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms