Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
IsxA1A546 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IsxA1A546 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IsxA1A546 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.25□□□□□ -0.13
IsxA1A546 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
IsxA1A546 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
IsxA1A546 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
IsxA1A546 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IsxA1A546 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IsxA1A546 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IsxA1A546 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
IsxA1A546 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
IsxA1A546 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
IsxA1A546 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.24□□□□□ -0.13
IsxA1A546 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
IsxA1A546 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.24□□□□□ -0.13
IsxA1A546 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
IsxA1A546 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
IsxA1A546 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
IsxA1A546 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IsxA1A546 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
IsxA1A546 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
IsxA1A546 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.23□□□□□ -0.13
IsxA1A546 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.23□□□□□ -0.13
IsxA1A546 Gm27463-201ENSMUST00000183569 57 ntBASIC14.23□□□□□ -0.13
IsxA1A546 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.23□□□□□ -0.13
IsxA1A546 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
IsxA1A546 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.23□□□□□ -0.13
IsxA1A546 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.23□□□□□ -0.13
IsxA1A546 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.23□□□□□ -0.13
IsxA1A546 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
IsxA1A546 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.23□□□□□ -0.13
IsxA1A546 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IsxA1A546 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.23□□□□□ -0.13
IsxA1A546 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IsxA1A546 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IsxA1A546 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IsxA1A546 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.22□□□□□ -0.13
IsxA1A546 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.22□□□□□ -0.13
IsxA1A546 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IsxA1A546 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IsxA1A546 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms