Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lnp1A0A1B0GSK3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.75□□□□□ -0.37
Lnp1A0A1B0GSK3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Gm6296-201ENSMUST00000222599 943 ntBASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.74□□□□□ -0.37
Lnp1A0A1B0GSK3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lnp1A0A1B0GSK3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lnp1A0A1B0GSK3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lnp1A0A1B0GSK3 Gm7153-201ENSMUST00000117092 455 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms