Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm24589-201ENSMUST00000116692 94 ntBASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhgb8A0A140LI48 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm34391-201ENSMUST00000203706 907 ntBASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhgb8A0A140LI48 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhgb8A0A140LI48 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhgb8A0A140LI48 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Pcdhgb8A0A140LI48 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.83□□□□□ -0.19
Pcdhgb8A0A140LI48 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms