Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm13474-201ENSMUST00000122466 815 ntBASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm21814-202ENSMUST00000203277 873 ntBASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm43353-201ENSMUST00000199224 1295 ntBASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 AC135963.1-201ENSMUST00000211640 717 ntBASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Efs-202ENSMUST00000227037 2540 ntBASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms