Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm6550-201ENSMUST00000187574 993 ntBASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv30A0A0B4J1P1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.52□□□□□ -0.56
Trbv30A0A0B4J1P1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv30A0A0B4J1P1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trbv30A0A0B4J1P1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms