Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm11355-201ENSMUST00000121120 306 ntBASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm45058-201ENSMUST00000205810 766 ntBASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-5A0A075B6B9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.33□□□□□ -0.43
Trav6d-5A0A075B6B9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6d-5A0A075B6B9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6d-5A0A075B6B9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm21559-201ENSMUST00000220638 855 ntBASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm8587-201ENSMUST00000076538 843 ntBASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-5A0A075B6B9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms