Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Mir3081-201ENSMUST00000175305 84 ntBASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Gm27742-201ENSMUST00000184667 60 ntBASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-1A0A075B699 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Efs-202ENSMUST00000227037 2540 ntBASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Gm13836-201ENSMUST00000121159 501 ntBASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Rprl3-201ENSMUST00000157400 290 ntBASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Gm44454-201ENSMUST00000198541 138 ntBASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-1A0A075B699 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9d-1A0A075B699 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms