Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav17A0A075B655 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav17A0A075B655 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.15□□□□□ -0.46
Trav17A0A075B655 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav17A0A075B655 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav17A0A075B655 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav17A0A075B655 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Mir770-201ENSMUST00000103252 94 ntBASIC12.14□□□□□ -0.47
Trav17A0A075B655 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Gm12134-201ENSMUST00000122109 520 ntBASIC12.14□□□□□ -0.47
Trav17A0A075B655 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Gm25406-201ENSMUST00000157599 105 ntBASIC12.14□□□□□ -0.47
Trav17A0A075B655 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav17A0A075B655 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms