Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Gm27275-201ENSMUST00000184318 272 ntBASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11□□□□□ -0.65
Trav8-1A0A075B641 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav8-1A0A075B641 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 H2-K2-201ENSMUST00000174250 1049 ntBASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Gm43183-201ENSMUST00000200632 547 ntBASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms