Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8n-2A0A075B633 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8n-2A0A075B633 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav8n-2A0A075B633 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav8n-2A0A075B633 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8n-2A0A075B633 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.97□□□□□ -0.17
Trav8n-2A0A075B633 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8n-2A0A075B633 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8n-2A0A075B633 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Gm15693-201ENSMUST00000120470 637 ntBASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Gm23547-201ENSMUST00000158210 271 ntBASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Gm16026-204ENSMUST00000162652 683 ntBASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Gm27437-201ENSMUST00000183429 107 ntBASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8n-2A0A075B633 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trav8n-2A0A075B633 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav8n-2A0A075B633 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trav8n-2A0A075B633 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav8n-2A0A075B633 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav8n-2A0A075B633 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav8n-2A0A075B633 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav8n-2A0A075B633 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav8n-2A0A075B633 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Gm8410-201ENSMUST00000117225 605 ntBASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Gm5866-201ENSMUST00000177881 973 ntBASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav8n-2A0A075B633 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Gm6415-201ENSMUST00000118488 348 ntBASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Trav8n-2A0A075B633 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav8n-2A0A075B633 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8n-2A0A075B633 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav8n-2A0A075B633 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8n-2A0A075B633 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8n-2A0A075B633 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8n-2A0A075B633 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8n-2A0A075B633 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8n-2A0A075B633 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms