Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm10013-201ENSMUST00000106074 672 ntBASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm14722-201ENSMUST00000118943 689 ntBASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ksr1-207ENSMUST00000226282 5260 ntBASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm6433-201ENSMUST00000118634 875 ntBASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 AC153881.2-201ENSMUST00000214877 204 ntBASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm8825-201ENSMUST00000182565 998 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm4518-201ENSMUST00000182638 718 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms