Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Gm10602-201ENSMUST00000098239 609 ntBASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav7n-4A0A075B620 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav7n-4A0A075B620 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.58□□□□□ -0.55
Trav7n-4A0A075B620 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Timm23-208ENSMUST00000226683 750 ntBASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7n-4A0A075B620 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms