Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Gm15165-201ENSMUST00000118140 502 ntBASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Trav9-1A0A075B601 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9-1A0A075B601 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Gm7506-201ENSMUST00000207758 815 ntBASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Efs-202ENSMUST00000227037 2540 ntBASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav9-1A0A075B601 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms