Protein–RNA interactions for Protein: Q9Z2D8

Mbd3, Methyl-CpG-binding domain protein 3, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3Q9Z2D8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3Q9Z2D8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 AA414768-201ENSMUST00000121924 1257 ntBASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.44■□□□□ 0.7
Mbd3Q9Z2D8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Gm4459-201ENSMUST00000118750 468 ntBASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3Q9Z2D8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Celf4-206ENSMUST00000224553 1729 ntBASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Gm8318-201ENSMUST00000182954 872 ntBASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3Q9Z2D8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.41■□□□□ 0.7
Mbd3Q9Z2D8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms