Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Gm8318-201ENSMUST00000182954 872 ntBASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Gm6089-201ENSMUST00000197666 938 ntBASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldn6Q9Z262 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Gm25990-201ENSMUST00000102440 86 ntBASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn6Q9Z262 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Gm6376-201ENSMUST00000209407 580 ntBASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn6Q9Z262 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn6Q9Z262 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn6Q9Z262 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cldn6Q9Z262 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Rps4l-201ENSMUST00000071745 943 ntBASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms