Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.67■□□□□ 0.1
Clcn2Q9R0A1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Sybu-209ENSMUST00000228639 4113 ntBASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn2Q9R0A1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Gm12644-201ENSMUST00000119935 606 ntBASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn2Q9R0A1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Clcn2Q9R0A1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn2Q9R0A1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms