Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.47□□□□□ -0.25
Nubp1Q9R060 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nubp1Q9R060 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.46□□□□□ -0.25
Nubp1Q9R060 Gm13365-201ENSMUST00000121188 973 ntBASIC13.46□□□□□ -0.25
Nubp1Q9R060 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.46□□□□□ -0.25
Nubp1Q9R060 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Gm37629-201ENSMUST00000193635 1050 ntBASIC13.46□□□□□ -0.25
Nubp1Q9R060 AC172027.1-201ENSMUST00000217659 337 ntBASIC13.46□□□□□ -0.25
Nubp1Q9R060 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.46□□□□□ -0.25
Nubp1Q9R060 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Nubp1Q9R060 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nubp1Q9R060 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Nubp1Q9R060 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nubp1Q9R060 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.45□□□□□ -0.26
Nubp1Q9R060 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.45□□□□□ -0.26
Nubp1Q9R060 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Gm17968-201ENSMUST00000194902 784 ntBASIC13.45□□□□□ -0.26
Nubp1Q9R060 Gm9682-201ENSMUST00000197505 556 ntBASIC13.45□□□□□ -0.26
Nubp1Q9R060 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.45□□□□□ -0.26
Nubp1Q9R060 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.45□□□□□ -0.26
Nubp1Q9R060 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.45□□□□□ -0.26
Nubp1Q9R060 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.45□□□□□ -0.26
Nubp1Q9R060 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.45□□□□□ -0.26
Nubp1Q9R060 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.45□□□□□ -0.26
Nubp1Q9R060 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nubp1Q9R060 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Gm649-201ENSMUST00000117284 1054 ntBASIC13.44□□□□□ -0.26
Nubp1Q9R060 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Gm23757-201ENSMUST00000158353 100 ntBASIC13.44□□□□□ -0.26
Nubp1Q9R060 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Gm25948-201ENSMUST00000175334 112 ntBASIC13.44□□□□□ -0.26
Nubp1Q9R060 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.44□□□□□ -0.26
Nubp1Q9R060 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms