Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shroom3Q9QXN0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Mir8117-201ENSMUST00000184773 107 ntBASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shroom3Q9QXN0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom3Q9QXN0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Gm10576-201ENSMUST00000191927 825 ntBASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms