Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.25■□□□□ 0.35
Hmgn5Q9JL35 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Gm37722-201ENSMUST00000193757 208 ntBASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Gm30025-201ENSMUST00000218555 728 ntBASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hmgn5Q9JL35 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn5Q9JL35 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmgn5Q9JL35 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Gm5417-201ENSMUST00000079706 384 ntBASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hmgn5Q9JL35 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hmgn5Q9JL35 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms