Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.05□□□□□ -0.16
ClpxQ9JHS4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpxQ9JHS4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClpxQ9JHS4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms