Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Gm18489-201ENSMUST00000172565 551 ntBASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Gm6376-201ENSMUST00000209407 580 ntBASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4bQ9D8B3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Chmp4bQ9D8B3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Chmp4bQ9D8B3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Chmp4bQ9D8B3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Chmp4bQ9D8B3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp4bQ9D8B3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Gm24589-201ENSMUST00000116692 94 ntBASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Gm7222-201ENSMUST00000117512 906 ntBASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4bQ9D8B3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Chmp4bQ9D8B3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Sybu-209ENSMUST00000228639 4113 ntBASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Gm7153-201ENSMUST00000117092 455 ntBASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4bQ9D8B3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Gm30437-201ENSMUST00000206086 1201 ntBASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4bQ9D8B3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms