Protein–RNA interactions for Protein: Q9D4C9

Clvs1, Clavesin-1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clvs1Q9D4C9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clvs1Q9D4C9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clvs1Q9D4C9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clvs1Q9D4C9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clvs1Q9D4C9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms