Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Gm10566-201ENSMUST00000086739 996 ntBASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim42Q9D2H5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Gm26039-201ENSMUST00000158152 144 ntBASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Gm10052-201ENSMUST00000168019 960 ntBASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Gm44430-201ENSMUST00000203376 995 ntBASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Gm7729-201ENSMUST00000050143 801 ntBASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim42Q9D2H5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim42Q9D2H5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim42Q9D2H5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim42Q9D2H5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim42Q9D2H5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim42Q9D2H5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Mir6404-201ENSMUST00000183699 94 ntBASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.33■□□□□ 0.04
Trim42Q9D2H5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim42Q9D2H5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Mir1668-201ENSMUST00000184114 107 ntBASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim42Q9D2H5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim42Q9D2H5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim42Q9D2H5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim42Q9D2H5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms