Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tmem88Q9D0N8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Tmem88Q9D0N8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tmem88Q9D0N8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tmem88Q9D0N8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tmem88Q9D0N8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tmem88Q9D0N8 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms