Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Raet1eQ9CZQ6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Raet1eQ9CZQ6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Raet1eQ9CZQ6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Raet1eQ9CZQ6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Raet1eQ9CZQ6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Raet1eQ9CZQ6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Raet1eQ9CZQ6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Raet1eQ9CZQ6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Raet1eQ9CZQ6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Raet1eQ9CZQ6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Gm12008-201ENSMUST00000117791 755 ntBASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Raet1eQ9CZQ6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms