Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Mir1668-201ENSMUST00000184114 107 ntBASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Gm44430-201ENSMUST00000203376 995 ntBASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Gm7367-201ENSMUST00000057611 492 ntBASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.49□□□□□ -0.41
Hdhd3Q9CYW4 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Gm8520-201ENSMUST00000186517 868 ntBASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hdhd3Q9CYW4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Gm37722-201ENSMUST00000193757 208 ntBASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hdhd3Q9CYW4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms