Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Gm38294-201ENSMUST00000192831 381 ntBASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Gm38225-201ENSMUST00000194001 393 ntBASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.99■□□□□ 0.63
Nip7Q9CXK8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Gm9824-201ENSMUST00000178707 561 ntBASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nip7Q9CXK8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.97■□□□□ 0.63
Nip7Q9CXK8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.96■□□□□ 0.63
Nip7Q9CXK8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.96■□□□□ 0.63
Nip7Q9CXK8 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.96■□□□□ 0.63
Nip7Q9CXK8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Gm17837-201ENSMUST00000186435 985 ntBASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms