Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.63□□□□□ -0.23
Mrpl54Q9CPW3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Mrpl54Q9CPW3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mrpl54Q9CPW3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mrpl54Q9CPW3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mrpl54Q9CPW3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mrpl54Q9CPW3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mrpl54Q9CPW3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Carlr-201ENSMUST00000181515 2574 ntBASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Gm26571-201ENSMUST00000181399 666 ntBASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mrpl54Q9CPW3 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Gm18284-201ENSMUST00000172604 624 ntBASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mrpl54Q9CPW3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mrpl54Q9CPW3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mrpl54Q9CPW3 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.58□□□□□ -0.23
Mrpl54Q9CPW3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.58□□□□□ -0.23
Mrpl54Q9CPW3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mrpl54Q9CPW3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mrpl54Q9CPW3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mrpl54Q9CPW3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Mrpl54Q9CPW3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms