Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Gm12957-201ENSMUST00000117835 377 ntBASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Gm18489-201ENSMUST00000172565 551 ntBASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col25a1Q99MQ5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col25a1Q99MQ5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Olfr582-201ENSMUST00000098212 960 ntBASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col25a1Q99MQ5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms