Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tlr3Q99MB1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tlr3Q99MB1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tlr3Q99MB1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tlr3Q99MB1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tlr3Q99MB1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Gm7222-201ENSMUST00000117512 906 ntBASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.42■□□□□ 0.22
Tlr3Q99MB1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Gm7230-201ENSMUST00000173026 815 ntBASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Mir5126-201ENSMUST00000175513 77 ntBASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tlr3Q99MB1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tlr3Q99MB1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.41■□□□□ 0.22
Tlr3Q99MB1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Gm15173-201ENSMUST00000122049 433 ntBASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tlr3Q99MB1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
Tlr3Q99MB1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Tlr3Q99MB1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Gm18489-201ENSMUST00000172565 551 ntBASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Gm5682-201ENSMUST00000173402 505 ntBASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Gm5264-201ENSMUST00000190584 848 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms