Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cstf3Q99LI7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Gm8655-201ENSMUST00000221159 852 ntBASIC14.82□□□□□ -0.04
Cstf3Q99LI7 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf3Q99LI7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Gm17807-201ENSMUST00000186869 298 ntBASIC14.81□□□□□ -0.04
Cstf3Q99LI7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.81□□□□□ -0.04
Cstf3Q99LI7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf3Q99LI7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.8□□□□□ -0.04
Cstf3Q99LI7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms