Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Gm12008-201ENSMUST00000117791 755 ntBASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Gm6257-201ENSMUST00000163864 910 ntBASIC15.29■□□□□ 0.04
Cstf1Q99LC2 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cstf1Q99LC2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.28■□□□□ 0.04
Cstf1Q99LC2 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.28■□□□□ 0.04
Cstf1Q99LC2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cstf1Q99LC2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cstf1Q99LC2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cstf1Q99LC2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cstf1Q99LC2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cstf1Q99LC2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cstf1Q99LC2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cstf1Q99LC2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cstf1Q99LC2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.27■□□□□ 0.03
Cstf1Q99LC2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cstf1Q99LC2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cstf1Q99LC2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cstf1Q99LC2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cstf1Q99LC2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms