Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Gm7222-201ENSMUST00000117512 906 ntBASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Gm18489-201ENSMUST00000172565 551 ntBASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb1Q91Y08 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhb1Q91Y08 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Gm7230-201ENSMUST00000173026 815 ntBASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Gm37153-201ENSMUST00000193637 231 ntBASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb1Q91Y08 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Gm7862-201ENSMUST00000121461 292 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms