Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb8Q91XZ2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb8Q91XZ2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb8Q91XZ2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Pcdhb8Q91XZ2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb8Q91XZ2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
Pcdhb8Q91XZ2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Pcdhb8Q91XZ2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb8Q91XZ2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb8Q91XZ2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms