Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Gm5186-201ENSMUST00000218781 920 ntBASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc5Q91XW9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc5Q91XW9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 AA543401-201ENSMUST00000164248 1269 ntBASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms