Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.2□□□□□ -0.3
Tram1Q91V04 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.2□□□□□ -0.3
Tram1Q91V04 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Tram1Q91V04 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tram1Q91V04 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tram1Q91V04 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.2□□□□□ -0.3
Tram1Q91V04 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.2□□□□□ -0.3
Tram1Q91V04 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.2□□□□□ -0.3
Tram1Q91V04 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.2□□□□□ -0.3
Tram1Q91V04 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.2□□□□□ -0.3
Tram1Q91V04 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tram1Q91V04 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tram1Q91V04 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.2□□□□□ -0.3
Tram1Q91V04 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tram1Q91V04 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tram1Q91V04 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tram1Q91V04 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.19□□□□□ -0.3
Tram1Q91V04 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Tram1Q91V04 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.19□□□□□ -0.3
Tram1Q91V04 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.19□□□□□ -0.3
Tram1Q91V04 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Gm715-201ENSMUST00000117865 831 ntBASIC13.19□□□□□ -0.3
Tram1Q91V04 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tram1Q91V04 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Tram1Q91V04 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tram1Q91V04 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tram1Q91V04 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tram1Q91V04 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.19□□□□□ -0.3
Tram1Q91V04 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tram1Q91V04 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.18□□□□□ -0.3
Tram1Q91V04 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tram1Q91V04 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Tram1Q91V04 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.18□□□□□ -0.3
Tram1Q91V04 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.18□□□□□ -0.3
Tram1Q91V04 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Gm26039-201ENSMUST00000158152 144 ntBASIC13.18□□□□□ -0.3
Tram1Q91V04 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.18□□□□□ -0.3
Tram1Q91V04 Mir1668-201ENSMUST00000184114 107 ntBASIC13.18□□□□□ -0.3
Tram1Q91V04 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.18□□□□□ -0.3
Tram1Q91V04 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.18□□□□□ -0.3
Tram1Q91V04 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tram1Q91V04 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.18□□□□□ -0.3
Tram1Q91V04 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tram1Q91V04 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tram1Q91V04 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms