Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4aQ8VEJ9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4aQ8VEJ9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Gm5364-201ENSMUST00000216789 889 ntBASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4aQ8VEJ9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Gm27702-201ENSMUST00000184512 56 ntBASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Gm10060-201ENSMUST00000212002 111 ntBASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Gm6296-201ENSMUST00000222599 943 ntBASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps4aQ8VEJ9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms