Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Grk6-207ENSMUST00000225925 2769 ntBASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Gm15824-201ENSMUST00000119516 955 ntBASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Mir6420-201ENSMUST00000185032 102 ntBASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lmcd1Q8VEE1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Gm12138-201ENSMUST00000122180 951 ntBASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Gm29667-201ENSMUST00000190817 490 ntBASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lmcd1Q8VEE1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Gm14722-201ENSMUST00000118943 689 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms