Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ccdc9Q8VC31 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc9Q8VC31 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Gm42748-201ENSMUST00000199354 2341 ntBASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc9Q8VC31 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Ccdc9Q8VC31 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Ccdc9Q8VC31 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Ccdc9Q8VC31 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ccdc9Q8VC31 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Gm43364-201ENSMUST00000196046 3274 ntBASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Gm43677-201ENSMUST00000198098 2378 ntBASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc9Q8VC31 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc9Q8VC31 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc9Q8VC31 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc9Q8VC31 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc9Q8VC31 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc9Q8VC31 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc9Q8VC31 Gm38094-201ENSMUST00000195864 2978 ntBASIC18.44■□□□□ 0.54
Ccdc9Q8VC31 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc9Q8VC31 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.44■□□□□ 0.54
Ccdc9Q8VC31 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc9Q8VC31 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ccdc9Q8VC31 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms