Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Gm5177-201ENSMUST00000183092 997 ntBASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.36■□□□□ 0.21
Rpp40Q8R1F9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Gm12008-201ENSMUST00000117791 755 ntBASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp40Q8R1F9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms