Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Mir1897-201ENSMUST00000122581 272 ntBASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Gm9719-201ENSMUST00000162765 543 ntBASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Gm15823-201ENSMUST00000064305 670 ntBASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx54Q8K4L0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Gm17150-201ENSMUST00000165577 381 ntBASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx54Q8K4L0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Gm11918-201ENSMUST00000121660 179 ntBASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.91■□□□□ 0.78
Ddx54Q8K4L0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Gm5566-201ENSMUST00000116118 459 ntBASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Gm37917-201ENSMUST00000194711 392 ntBASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx54Q8K4L0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ddx54Q8K4L0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ddx54Q8K4L0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Ddx54Q8K4L0 Gm22189-201ENSMUST00000103822 86 ntBASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 AY702102-202ENSMUST00000194651 1173 ntBASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx54Q8K4L0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms