Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Gm7787-201ENSMUST00000216858 688 ntBASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtn1Q8K0T0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Gm4899-201ENSMUST00000178708 719 ntBASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Gm27628-201ENSMUST00000184911 107 ntBASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn1Q8K0T0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.64■□□□□ 0.42
Rtn1Q8K0T0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rtn1Q8K0T0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.64■□□□□ 0.42
Rtn1Q8K0T0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Gm18733-201ENSMUST00000173950 856 ntBASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rtn1Q8K0T0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn1Q8K0T0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms