Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.25■□□□□ 0.35
Syne4Q8CII8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Syt7-205ENSMUST00000224135 1557 ntBASIC17.25■□□□□ 0.35
Syne4Q8CII8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Gm14127-201ENSMUST00000117906 678 ntBASIC17.25■□□□□ 0.35
Syne4Q8CII8 Gm14767-201ENSMUST00000121559 586 ntBASIC17.25■□□□□ 0.35
Syne4Q8CII8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.25■□□□□ 0.35
Syne4Q8CII8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Gm27920-201ENSMUST00000183953 96 ntBASIC17.25■□□□□ 0.35
Syne4Q8CII8 Gm18766-201ENSMUST00000189811 808 ntBASIC17.25■□□□□ 0.35
Syne4Q8CII8 Gm44855-201ENSMUST00000205725 362 ntBASIC17.25■□□□□ 0.35
Syne4Q8CII8 Gm9063-201ENSMUST00000223299 582 ntBASIC17.25■□□□□ 0.35
Syne4Q8CII8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne4Q8CII8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.24■□□□□ 0.35
Syne4Q8CII8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne4Q8CII8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.23■□□□□ 0.35
Syne4Q8CII8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.23■□□□□ 0.35
Syne4Q8CII8 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.23■□□□□ 0.35
Syne4Q8CII8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Gm14719-201ENSMUST00000121891 340 ntBASIC17.23■□□□□ 0.35
Syne4Q8CII8 Gm15487-201ENSMUST00000122373 465 ntBASIC17.23■□□□□ 0.35
Syne4Q8CII8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.23■□□□□ 0.35
Syne4Q8CII8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne4Q8CII8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms