Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam228aQ8CDW1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Gm6433-201ENSMUST00000118634 875 ntBASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.09■□□□□ 0.17
Fam228aQ8CDW1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fam228aQ8CDW1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fam228aQ8CDW1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Fam228aQ8CDW1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fam228aQ8CDW1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fam228aQ8CDW1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fam228aQ8CDW1 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.08■□□□□ 0.16
Fam228aQ8CDW1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm10013-201ENSMUST00000106074 672 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm8825-201ENSMUST00000182565 998 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm4518-201ENSMUST00000182638 718 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms