Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm10013-201ENSMUST00000106074 672 ntBASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd4Q8CC84 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd4Q8CC84 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Gm18032-201ENSMUST00000222541 538 ntBASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Lysmd4Q8CC84 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms