Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa4Q8CA71 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Mir3113-201ENSMUST00000175478 76 ntBASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shisa4Q8CA71 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa4Q8CA71 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Thap2-203ENSMUST00000218989 527 ntBASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa4Q8CA71 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms