Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptcd1Q8C2E4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptcd1Q8C2E4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptcd1Q8C2E4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptcd1Q8C2E4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptcd1Q8C2E4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptcd1Q8C2E4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptcd1Q8C2E4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptcd1Q8C2E4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptcd1Q8C2E4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptcd1Q8C2E4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptcd1Q8C2E4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Gm12008-201ENSMUST00000117791 755 ntBASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Gm43767-201ENSMUST00000198933 381 ntBASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Gm5779-201ENSMUST00000218467 910 ntBASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.81■□□□□ 0.6
Ptcd1Q8C2E4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Gm13823-201ENSMUST00000119930 345 ntBASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Gm12151-201ENSMUST00000121374 290 ntBASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ptcd1Q8C2E4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms