Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam43aQ8BUP8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Fam43aQ8BUP8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Fam43aQ8BUP8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Fam43aQ8BUP8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Fam43aQ8BUP8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.13■□□□□ 0.33
Fam43aQ8BUP8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Gm15794-201ENSMUST00000120182 631 ntBASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Gm27704-201ENSMUST00000185094 107 ntBASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam43aQ8BUP8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms